Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015940196.1_cds_XP_016484506.1_75516
CDS Infomation	[gene=LOC107805046] [db_xref=GeneID:107805046] [protein=DNA mismatch repair protein MSH6-like] [protein_id=XP_016484506.1] [location=join(30231..31113,31706..31799,31933..32035,32119..32172,32305..32379,32679..32747,32862..32945,33044..33235,34151..34701,34775..34904,35786..35877,35969..36147,36218..36420,36510..36611,37294..37456,38472..38761,38833..38970,39450..39529,39657..39756,40006..40135,40359..40591)] [gbkey=CDS]
Sequence	ATGGGTTCTTCTCGCCGCTCCAGCAATGGCAGATCTCCGATCGTCAATCAACAGAGTCAA ATCACTTCTTTCTTCTCTAAAATGACTTCGCCCTCACCTTCTCCTTCCCCATCACCTCTT GTCCCTAAAAAAATTCCAGTCAAATCTAACCCTAACCCTAACCCTAATGCTGAGCCTAAA CTTAAATATAGTCCTAGTACCAGTCCTTGTGCTAGTCCTACGACACCTTCGCCTCTACAG GTGAAGCGGAAGATAACTGCACCTATTTCTGCCATTATTGACCTTAAGCCGTCGTACGGG CAAGAGATAGTGGGCAAAAGAGTTAAGGTCTACTGGCCATTGGATAGAACTTGGTACGAA GGCTGTGTAAAGTCTTTCGACGGTGTTTCTGGTGAACATTTGGTTAAGTACGACGATGGT GATGAGGAAATGATTGATTTAGCTGAAGAAAAGATCGAATTGGTAGTCGAGGCACCTGCG AGAAAGTTGAGGCGGTTGCGGAAATCTTTGGTGGTGGAAGAAGCTGAGGAGGAGGAGGAG GAAGAGAAATTGGAGGATTTGGAGAGCGTTGAAGATGATTCTGAGGATGAAGATTGGGGA AAAATTGCGGATAAACAAGTGTATGAAGACGAGGATGTTGATGAGGATATGGACTTGGTG GTTGAGGAAGAGAAAGATGATGCTGTTGGATCGAGAAGCAGGAAAGCGGGTGCGGATAAG GTGGTGGTGTCGAGGAAGCGGAAGAGTGGTGAAGGGGTGAAGTTAAGTTCGAGTTCGAGC AAGAAGAGTAAGACTCTTGCAGATAAGAAGAGTGCTAATAGCAAGGTGGACAATGCAGTG AATGGAGTAAATGGGAAAGAGCTTGTTAAAACCAATGAGGATTGTGTCAGGCCAACCAAC AATGATAACGTACTGCTGTGCGGTGCAGCAGATAGATTCGGACAACGTGAAGCAGAGAAA TTCCCTTTTGTTGCGAAAGATAGGAAGGACGCTAATAGGAGATCCCCTGGAGATGCCAAT TATGATCCAAAGACTCTTTACCTACCTCCTAATTTTTTGAAAGGTTTAACTGGTGGTCAG AGACAATGGTGGGAGTTCAAGTCGAAGCACATGGATAAAGTTCTGTTTTTTAAGATGGGA AAGTTCTATGAGCTTTATGAGATGGATGCACATATTGGAACCAAGGAACTTCATTTGCAG TACATGAAGGGAGAACAACCCCATTGTGGATTTCCAGAAAAGAACTTCTCAATGAATGTA GAGAAGTTGGCGCGAAAGGGTTATAGGGTTCTTGTGGTTGAGCAAACAGAGACACCTGAA CAGCTTGAGACTCGTCGAAGAGAGAAGGGATCTAAAGATAAGGTCGTCAGACGTGAAATA TGTGCAGTGGTCACTAAAGGAACATTAACTGAGGGAGAAATGCTCGCAGCAAACCCTGAT GCTTCATATATGATGGCAGTGACTGAAAGCTCTCAAACTGCTGTATTGCAAGGGAAGCGT ACTTATGGTGTCTGTATGGTGGATATCACCACAAGCAAGGTTATTATTGGACAGTTTGAG GATGATTCAGATTGTAGTGCCTTGTGTTGTCTGCTTTCTGAGTTAAGACCAGTGGAAATA ATAAAGCCAGCTAAATTGCTTAGTCTTGAGACTGAGAGAGTACTGCTGCGGTACACACGT AATCCGCTGGTAAATGAGTTGGTTCCTGTCTCTGAATTTTGGGATGCTGAGAGAACCATT TGTGAGGTGAAGGCAATCTATAGGAATATGAGCAGTCCACCGCTGACATCATCTCCAAAT GAAATGGAATCACATGAAAGCACTACCTCAGAGGAATATGGTGAAAGGAACCTTCTACCA GATGTTTTATGTGAGCTTGTAAATCTTGGTAGGAATGGGAGTTATGCACTCTCAGCACTA GGAGGAGCTCTATACTACTTGAAGCAAGCTTTTCTGGACGAATCCCTGCTCAAATTTGCG AAATTTGAACCACTTCCCCTTTCTGGTTTTTGTGATAGTACTCAAAAACCGAATATGGCT CTTGATGCAGCTGCGCTTGAGAATCTTGAGATATTTGAGAACAGTCGAGATGGAGATTCT TCAGGGACATTATACGCTCAAATCAACCATTGTATCACAGCATTTGGGAAAAGGATGCTC AGGTCATGGCTTGCAAGACCCTTATATCATCCAGAGTCCATAAGAGAACGTCAGGATGCT GTAGCCGGATTAAAGGGGCTCAATCTACCTTTTGTTCTTGAGTTTAGAAAAGAGTTGTCA AGGCTTCCTGATATGGAACGGTTGCTTGCACGCCTCTTTGGTAGCAGTGAAGCAAATGGA AGAAATGCAAATAAAGTGATTTTATACGAGGATGCAGCAAAGAAACAACTGCAAGAGTTC GTATCTGCTTTACGTGGATGTGAATCAATGGTGCATGCATGCTCTTCACTTGGGGTGATC TTGGAAAACATGGATTCAAAGCTACTATATTATCTATTAACACCAGGTAAAGGTCTTCCA GATGTAGATTCAATTCTCAAGCATTTCAAGGATGCTTTTGATTGGGTAGAAGCAAATAAC TCGGGCCGTATTATACCTCATGAGGGGGTTGATGAGGAGTATGATGCTGCATGTAAACAA TTGCAGGAGATTGAACTTAAATTATCCAAGCACTTGAAGGAACAGAGGAAACTGCTTGGA GACTCATCAATAGACTACGTGACTGTAGGAAAAGATGCATACCTTTTGGAAGTACCAGAA TGTTTGTGCAGGAGCATTCCGAAGGAGTACGAATTACAGTCATCGAAAAAGGGTTATTTC AGGTACTGGAATCCAGTCTTAAAGAAATTAATCGGAGAGCTCTCACAAGCTGATTCAGAG AAGGAATCTAAGCTAAAAAGTATTTTGCAGAGGTTGATAGGACGGTTTTGTGAACATCAT AATAAGTGGAGAGAATTAGTTTGTATCACTGCAGAATTGGATGTTTTAATCAGTTTATCT ATTGCGAGCGATTACTATGAGGGACCAACATGTCGTCCAAACATCAAGTCAGTGCCAAGT GAAGATGATGTGCCAGTTCTTCATGCTGAAAATTTAGGACATCCTGTTCTTAAAAGTGAT TCTCTAGATAAGGGAGCTTTTGTTTCCAACAATGTTTCCCTTGGCGGTCCTCCGAACGCC AGCTTTATCCTTCTTACTGGTCCTAACATGGGAGGGAAATCCACTCTTTTGCGCCAAGTT TGCATGGCTGTAATTTTGGCCCAGATAGGAGCTGATGTACCAGCATCATCCTTTGACTTA TCACCCGTCGATCGTATATTTGTAAGAATGGGGGCCAAAGATCATATTATGGCAGGCCAG AGTACATTCTTGACAGAACTCTTGGAAACTGCTTCAATGCTGTCTTTGGCGAGCCGTAAT TCACTTGTCGCACTCGATGAACTTGGTCGCGGTACATCAACTTCCGATGGACAAGCAATA GCTGAATCAGTTCTTGAACACTTTGTCCACAAGGTGCAATGTCGAGGAATGTTTTCTACC CACTATCATCGATTATCTATTGACTATCAGAAAGATTCCAGAGTGTCACTGTGCCATATG GCATGCCAAGTTGGGAAAGGGTCCGGAGGTCTTGAGGAAGTTACTTTTCTATACAGGTTG ACACCAGGTGCATGTCCTAAAAGTTATGGTGTCAATGTGGCACGGCTGGCTGGACTTCCT GATGGTGTGCTTCAGAGAGCTGCTGCTAAATCTGAAGAGTTTGAAATTAATGGTTACAAT AAGCAATCTGAAGAGAACTCCTATGGGAATTTGACAAGAAAGACAGCAGCACTTGTGCAG AATTTGATGAATTTTATTATTGAAGAGAAATGTGACAATGGTGTGGTTCTTTGTGAGTTG AATGGATTGCAAAGGAGAGCAAGAATACTCCTTGAACAAAATTGA

Peptide Sequence

PEP ID	XP_016484506.1
PEP Infomation	PREDICTED: DNA mismatch repair protein MSH6-like [Nicotiana tabacum]
Sequence	MGSSRRSSNGRSPIVNQQSQITSFFSKMTSPSPSPSPSPLVPKKIPVKSNPNPNPNAEPK LKYSPSTSPCASPTTPSPLQVKRKITAPISAIIDLKPSYGQEIVGKRVKVYWPLDRTWYE GCVKSFDGVSGEHLVKYDDGDEEMIDLAEEKIELVVEAPARKLRRLRKSLVVEEAEEEEE EEKLEDLESVEDDSEDEDWGKIADKQVYEDEDVDEDMDLVVEEEKDDAVGSRSRKAGADK VVVSRKRKSGEGVKLSSSSSKKSKTLADKKSANSKVDNAVNGVNGKELVKTNEDCVRPTN NDNVLLCGAADRFGQREAEKFPFVAKDRKDANRRSPGDANYDPKTLYLPPNFLKGLTGGQ RQWWEFKSKHMDKVLFFKMGKFYELYEMDAHIGTKELHLQYMKGEQPHCGFPEKNFSMNV EKLARKGYRVLVVEQTETPEQLETRRREKGSKDKVVRREICAVVTKGTLTEGEMLAANPD ASYMMAVTESSQTAVLQGKRTYGVCMVDITTSKVIIGQFEDDSDCSALCCLLSELRPVEI IKPAKLLSLETERVLLRYTRNPLVNELVPVSEFWDAERTICEVKAIYRNMSSPPLTSSPN EMESHESTTSEEYGERNLLPDVLCELVNLGRNGSYALSALGGALYYLKQAFLDESLLKFA KFEPLPLSGFCDSTQKPNMALDAAALENLEIFENSRDGDSSGTLYAQINHCITAFGKRML RSWLARPLYHPESIRERQDAVAGLKGLNLPFVLEFRKELSRLPDMERLLARLFGSSEANG RNANKVILYEDAAKKQLQEFVSALRGCESMVHACSSLGVILENMDSKLLYYLLTPGKGLP DVDSILKHFKDAFDWVEANNSGRIIPHEGVDEEYDAACKQLQEIELKLSKHLKEQRKLLG DSSIDYVTVGKDAYLLEVPECLCRSIPKEYELQSSKKGYFRYWNPVLKKLIGELSQADSE KESKLKSILQRLIGRFCEHHNKWRELVCITAELDVLISLSIASDYYEGPTCRPNIKSVPS EDDVPVLHAENLGHPVLKSDSLDKGAFVSNNVSLGGPPNASFILLTGPNMGGKSTLLRQV CMAVILAQIGADVPASSFDLSPVDRIFVRMGAKDHIMAGQSTFLTELLETASMLSLASRN SLVALDELGRGTSTSDGQAIAESVLEHFVHKVQCRGMFSTHYHRLSIDYQKDSRVSLCHM ACQVGKGSGGLEEVTFLYRLTPGACPKSYGVNVARLAGLPDGVLQRAAAKSEEFEINGYN KQSEENSYGNLTRKTAALVQNLMNFIIEEKCDNGVVLCELNGLQRRARILLEQN

Transcript Sequence

Gene sequence data has not been registered.